Examples

The following examples show off various aspects or capabilities of MDEntropy. They can be run interactively in Jupyter (IPython) notebook. Download the notebook files and open them in Jupyter:

$ jupyter notebook

• Mutual Information

Please note that additional requirement for these notebooks inclue the latest versions of matplotlib, nglview, and msmexplorer.

Contributing examples

Do you have a neat example of using MDEntropy? Format your code into an IPython notebook and submit a pull request!