Installing and getting started

To install the released version of msmexplorer, you can use pip:

$ pip install msmexplorer

It’s also possible to install the released version using conda:

$ conda install -c omnia msmexplorer

Alternatively, you can use pip to install the development version, with the command:

$ pip install git+git://github.com/msmexplorer/msmexplorer.git#egg=msmexplorer

Another option would be to to clone the github repository and install with pip install . from the source directory. MSMExplorer itself is pure Python, so installation should be reasonably straightforward.

Dependencies

  • Python 3.4+

Mandatory dependencies

The latest versions of the following packages are required:

Importing msmexplorer

By convention, msmexplorer is abbreviated to msme on import.

Bugs

Please report any bugs you encounter through the github issue tracker. It will be most helpful to include a reproducible example. It is difficult debug any issues without knowing the versions of msmexplorer, seaborn, and matplotlib you are using, as well as what matplotlib backend you are using to draw the plots, so please include those in your bug report.