msmbuilder.clustering.concatenate_prep_trajectories¶

msmbuilder.clustering.concatenate_prep_trajectories(prep_trajectories, metric)[source]¶

Concatenate a list of prepared trajectories and create a single prepared_trajectory.

This is non-trivial because the RMSD and LPRMSD prepared trajectories are not np.ndarrays ...

Parameters:	prep_trajectories : list list of prepared trajectories metric : msmbuilder.metrics.AbstractDistance metric subclass instance metric used to prepare the trajectories. Needed for RMSD and LPRMSD since concatenation requires recreating the prepared trajectory
Returns:	ptraj : prepared_trajectory prepared trajectory instance, like that returned from metric.prepare_trajectory